MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG02576
Description: ABC transporter protein

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The abundance of bactNOG02576 across gut microbiome samples:





The prevalence of bactNOG02576 across gut microbiome samples:





Association of bactNOG02576 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesDenmark752770.0001072943250386.3561156882e-050.118489985171035333.9365
Colorectal cancerAustria64350.0003810732594050.001512762865080.124047403455586819.8538
Crohns diseaseSpain17660.0002357741327356.47684617875e-050.2845036355161889862.8362
Type II diabetesChina1831850.0003035373165840.0001183430639860.2995691900971629253.8402
Ulcerative colitisSpain78660.0001747970976196.47684617875e-050.3264302037441461148.1989
ObesityDenmark1691234.5398584939e-059.07280699975e-050.4846856488461893862.2735
Rheumatoid arthritisChina127980.0001567058493464.57637765141e-050.7798868740152440981.3986
Type II diabetesSweden53920.0002964437499030.0002552362950670.927640797482760693.4846
Liver cirrhosisChina1201142.40882003234e-061.9969780911e-060.9964927847982959799.4205
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382