MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG03214
Description: ABC transporter protein

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The abundance of bactNOG03214 across gut microbiome samples:





The prevalence of bactNOG03214 across gut microbiome samples:





Association of bactNOG03214 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesChina1831850.01992476285880.01367385484980.00086799650391915585.14888
Crohns diseaseSpain17660.01130487801750.01063358955320.07732365385521292042.9593
Type II diabetesSweden53920.004173658802450.00550226649760.0775845490514296610.044
Liver cirrhosisChina1201140.009776349420630.01051152459860.08140587050251585153.2467
Type II diabetesDenmark752770.01306268313380.009820649690620.1596113190771170838.3781
Rheumatoid arthritisChina127980.01195760106970.01317331321130.184451647935837727.9354
ObesityDenmark1691230.01053057801940.008708855255550.203045648041112536.5805
Colorectal cancerAustria64350.003847534448710.004500624858860.5358017580511909164.5909
Ulcerative colitisSpain78660.01209234080360.01063358955320.6900709837432353777.644
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382