MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG03438
Description: ABC transporter protein

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The abundance of bactNOG03438 across gut microbiome samples:





The prevalence of bactNOG03438 across gut microbiome samples:





Association of bactNOG03438 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.0007321979291410.000348646095540.01133541396820016.60091
Type II diabetesDenmark752778.09182148563e-061.29090073339e-060.012918748689467315.3178
Colorectal cancerAustria64350.0005761249355490.0009594932098480.023025322178815095.10556
Liver cirrhosisChina1201140.05.90695631935e-060.1563879208891823461.2516
Rheumatoid arthritisChina127981.45878745005e-062.52567747803e-050.201647216091899129.9813
Crohns diseaseSpain17668.46895586708e-060.000348646095540.2492648144911797859.7772
Type II diabetesSweden53920.0002156556317160.0004185293782470.3304266710711128838.2255
Type II diabetesChina1831850.05.04861629845e-060.3434987884141742357.5779
ObesityDenmark1691232.10052498915e-061.1224504281e-070.5091037414851955964.3139
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382