MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG05883
Description: ABC transporter protein

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The abundance of bactNOG05883 across gut microbiome samples:





The prevalence of bactNOG05883 across gut microbiome samples:





Association of bactNOG05883 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.003588707770430.006737819260911.10830600544e-05365812.288
ObesityDenmark1691230.008326056242870.004298079823970.0412974584304455414.9748
Colorectal cancerAustria64350.002413971410110.0009905158076440.0878893731428448815.1847
Ulcerative colitisSpain78660.003710702890650.005067568015310.1978012119871058234.9063
Rheumatoid arthritisChina127980.00299996918670.004838159185890.4066056567231495049.8533
Crohns diseaseSpain17660.004955128536120.005067568015310.4770788811712277175.7141
Type II diabetesSweden53920.002754429056650.00350449498510.5034877296491622854.9526
Type II diabetesChina1831850.004937477238080.006411433767570.6493270620642405579.497
Type II diabetesDenmark752770.009024525326680.006699163830810.6977530710542476181.165
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382