MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG07805
Description: Phosphonate ABC transporter, periplasmic phosphonate-binding protein

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The abundance of bactNOG07805 across gut microbiome samples:





The prevalence of bactNOG07805 across gut microbiome samples:





Association of bactNOG07805 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.05.58932640655e-050.1563879208891823461.2516
Ulcerative colitisSpain78663.98128040575e-052.37698104959e-060.21571925961115436.7932
ObesityDenmark1691235.00531259604e-060.00.2400805632561249041.069
Rheumatoid arthritisChina127988.68659370772e-052.31572342514e-050.2866326220471170439.0286
Type II diabetesDenmark752770.02.96611116802e-060.4584131728911954864.0755
Colorectal cancerAustria64354.86041421937e-053.48541153861e-050.5551974836331954866.1372
Crohns diseaseSpain17660.02.37698104959e-060.632888554432565085.2851
Type II diabetesChina1831853.1103160533e-056.04658323101e-050.8052937807352669988.2349
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382