MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG08012
Description: ABC transporter periplasmic solute-binding protein

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The abundance of bactNOG08012 across gut microbiome samples:





The prevalence of bactNOG08012 across gut microbiome samples:





Association of bactNOG08012 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Crohns diseaseSpain17660.02206183995490.03654386937630.000668801460022370612.3209
Liver cirrhosisChina1201140.0300399386190.03474189361390.01803119175141202640.3977
Type II diabetesDenmark752770.06152572565320.05491729745020.1588897567211168738.3092
Type II diabetesSweden53920.0349711644910.03891630111210.163297195705572419.382
Rheumatoid arthritisChina127980.03787691233950.02801957095370.185854834011843428.1239
ObesityDenmark1691230.05284608475630.05741415617610.2099182686771136537.3713
Ulcerative colitisSpain78660.04166859271230.03654386937630.2284225161421163538.3816
Colorectal cancerAustria64350.03038257150680.02287629139420.5362611711011912464.7026
Type II diabetesChina1831850.02796300368140.02837505012820.893244638882831493.5722
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382