MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG08646
Description: ABC transporter protein

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The abundance of bactNOG08646 across gut microbiome samples:





The prevalence of bactNOG08646 across gut microbiome samples:





Association of bactNOG08646 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
ObesityDenmark1691230.000247806253811.12161349305e-050.0197818245115318710.4798
Type II diabetesDenmark752771.34642398916e-050.00015145922810.1656191567781193639.1254
Crohns diseaseSpain17662.13534564382e-052.26683341404e-060.298024571881921963.9019
Ulcerative colitisSpain78665.63520678811e-052.26683341404e-060.3769513530511611753.1652
Type II diabetesSweden53920.02.58810245074e-050.4424149874041443248.8706
Rheumatoid arthritisChina127981.04069369813e-051.94276325768e-050.4579550479941651455.0705
Type II diabetesChina1831852.35141723395e-052.82628869172e-050.8052937807352669988.2349
Liver cirrhosisChina1201146.70387804427e-063.04721061982e-061.02972199.8371
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382