MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG08800
Description: ABC transporter protein

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The abundance of bactNOG08800 across gut microbiome samples:





The prevalence of bactNOG08800 across gut microbiome samples:





Association of bactNOG08800 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.001679916062990.0005616822462330.0003260675107173501.15458
Type II diabetesChina1831850.0005879653590897.38886700993e-050.0226345847389508616.8082
Rheumatoid arthritisChina127980.0002984779069470.0006012638643410.026657080391720456.81962
ObesityDenmark1691230.0003004328822730.0005016064391840.0754446539729630820.7425
Colorectal cancerAustria64350.004225526544130.005172972779420.169545899256743525.1556
Type II diabetesSweden53920.00147362923690.001788007149470.3721961994651225941.5137
Liver cirrhosisChina1201143.36184705425e-058.8777550876e-050.4024192221992312277.6714
Type II diabetesDenmark752770.0003633975329770.000384250281160.7429548935432555883.7775
Crohns diseaseSpain17660.0005698585374890.0005616822462330.8440959724492825293.9385
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382