MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG10438
Description: ABC transporter protein

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The abundance of bactNOG10438 across gut microbiome samples:





The prevalence of bactNOG10438 across gut microbiome samples:





Association of bactNOG10438 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.0001012177845590.0002005834285870.07558505675311563152.5076
Rheumatoid arthritisChina127980.0008245239203990.000829727725840.0844686528154474715.8302
Crohns diseaseSpain17660.0003033725614150.0007820579214070.1911262560971657555.1122
Type II diabetesSweden53920.002037617018380.001032900548240.236485760205820927.7972
Type II diabetesDenmark752770.001469393701210.00173976196850.4699961877031983465.0146
Ulcerative colitisSpain78660.0005650784783620.0007820579214070.7077190435592388178.7788
ObesityDenmark1691230.001783908551850.001660453722510.8644784783622772791.1742
Type II diabetesChina1831850.0002179471192950.0002609464940080.8716234103162786692.0916
Colorectal cancerAustria64350.0009956074316050.00428713371470.9902621012172931199.1694
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382