MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG14766
Description: ABC transporter protein

Click here to download results

The abundance of bactNOG14766 across gut microbiome samples:





The prevalence of bactNOG14766 across gut microbiome samples:





Association of bactNOG14766 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.002679892112050.001325650810610.0366026617578405513.3767
Rheumatoid arthritisChina127980.0006893375952290.0007677774611150.0912480914086497416.5872
Type II diabetesDenmark752770.000583061434590.0004421160809480.098744610379961731.5239
ObesityDenmark1691230.000441045691480.0004401704272090.147253297405913730.045
Type II diabetesChina1831850.0008100379936880.0003360244768790.1832809368731276342.1792
Colorectal cancerAustria64350.0122214160610.01629951599630.221585446873960232.4858
Liver cirrhosisChina1201140.0002384711446050.0001489152256050.7390615969292711291.0746
Crohns diseaseSpain17660.001223255277410.001325650810610.7906432213522755291.611
Type II diabetesSweden53920.00218877023750.002834038582080.9037020609512699291.4053
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382