MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG16243
Description: ABC transporter ATP-binding protein

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The abundance of bactNOG16243 across gut microbiome samples:





The prevalence of bactNOG16243 across gut microbiome samples:





Association of bactNOG16243 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
ObesityDenmark1691230.001277143909190.0004838764721130.0608995896212552818.1776
Ulcerative colitisSpain78660.001055118500450.0004437889576290.135593799806856628.2576
Type II diabetesChina1831850.0007256836373320.0008419523946940.3556120693121780758.8486
Crohns diseaseSpain17660.000231717268060.0004437889576290.3638110779752076769.0507
Type II diabetesDenmark752770.0003816139936680.0009557530143530.420560231981867361.2089
Rheumatoid arthritisChina127980.0002797830540060.0004722906659090.6056540111742002266.7689
Type II diabetesSweden53925.42609177501e-050.0003273384329820.6606980700722045569.2685
Liver cirrhosisChina1201140.0007855826649060.0004918567959850.8675489467072830395.0754
Colorectal cancerAustria64350.0001333441421140.0003459006352520.9536682584962852496.5083
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382