MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG16899
Description: ABC transporter protein

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The abundance of bactNOG16899 across gut microbiome samples:





The prevalence of bactNOG16899 across gut microbiome samples:





Association of bactNOG16899 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Colorectal cancerAustria64350.0002588074080450.0002505957148970.0543101129133305210.3262
Type II diabetesSweden53920.0001627278131010.0004054424629060.209523633059747425.3099
Crohns diseaseSpain17660.0003448950797870.0006683239670830.2217942337891736357.7323
Type II diabetesDenmark752770.0005942586184630.0007261311023660.6258906611952315975.9137
ObesityDenmark1691230.0008648734608870.0005196003954670.6640326142642312076.0251
Rheumatoid arthritisChina127980.0008156767796070.0006076412175060.7659612184422408280.3081
Ulcerative colitisSpain78660.0009109479203790.0006683239670830.7896763603822549784.1096
Type II diabetesChina1831850.0008288561650610.000525017412430.8608392583962764991.3745
Liver cirrhosisChina1201140.0008298830637890.0005838857762510.9274634524572868496.3553
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382