MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG17179
Description: ABC transporter permease protein

Click here to download results

The abundance of bactNOG17179 across gut microbiome samples:





The prevalence of bactNOG17179 across gut microbiome samples:





Association of bactNOG17179 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201144.60598620323e-050.0001731787150156.71303407663e-05483316.235
ObesityDenmark1691230.000270979230010.0007224770026270.0051612617098518165.97152
Type II diabetesChina1831850.000102694629970.0001714190196030.00828216278812346911.4644
Crohns diseaseSpain17661.21474263056e-060.0002013086067920.06143421109691225540.7465
Rheumatoid arthritisChina127980.0001252725847080.0002253264559170.2492255962971041234.7217
Type II diabetesDenmark752770.0004692469217120.0004575986077520.4317778507141890761.9759
Ulcerative colitisSpain78660.0002815689010220.0002013086067920.4622456663761822560.1207
Colorectal cancerAustria64350.0001012477326877.45734860954e-050.9609408174282865596.9516
Type II diabetesSweden53920.0004863729776240.0002295672404731.02948799.8544
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382