MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG17447
Description: ABC transporter, permease protein

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The abundance of bactNOG17447 across gut microbiome samples:





The prevalence of bactNOG17447 across gut microbiome samples:





Association of bactNOG17447 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.001634922688450.000117172394050.0068869448742915104.9812
Liver cirrhosisChina1201140.0001854054016410.000235130174460.05496280118141475249.5549
Type II diabetesDenmark752770.000796537201750.001495619243970.0611190481793792525.9776
Colorectal cancerAustria64350.0006640373844680.005058403671840.153938595247697123.5857
Crohns diseaseSpain17669.71239111791e-050.000117172394050.2028883991671684055.9917
ObesityDenmark1691230.001410804805540.001604400243110.2907510570761389745.6973
Type II diabetesChina1831850.0008080987909120.0004361971095830.7452774297062568684.8871
Rheumatoid arthritisChina127980.0008958208506630.001012943079780.8732116826912704590.1891
Type II diabetesSweden53920.002237493038740.00201922100020.9248293470962753793.2509
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382