MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG19355
Description: ABC transporter (permease)

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The abundance of bactNOG19355 across gut microbiome samples:





The prevalence of bactNOG19355 across gut microbiome samples:





Association of bactNOG19355 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.001274411614390.002197868918810.00380357465437920730.9281
Type II diabetesDenmark752770.00085161296350.001497784362320.00821632029385409913.4363
Type II diabetesChina1831850.001042882379890.001422812843990.0668329290947789426.0881
Ulcerative colitisSpain78660.001797152609860.001443165973730.0829166047576637421.0266
Crohns diseaseSpain17660.0008927231147920.001443165973730.1317257920671482749.2984
ObesityDenmark1691230.001392234581980.001664549050510.6634894442722311275.9988
Type II diabetesSweden53920.001583980577080.001235443496110.678056298212085770.6282
Colorectal cancerAustria64350.0005211576615240.0005531519460160.736767078612389880.855
Rheumatoid arthritisChina127980.0009883257523650.001399912326170.8362267477922577985.9673
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382