MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG23888
Description: ABC transporter ATP-binding protein

Click here to download results

The abundance of bactNOG23888 across gut microbiome samples:





The prevalence of bactNOG23888 across gut microbiome samples:





Association of bactNOG23888 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Crohns diseaseSpain17660.002907937661460.007715066280240.00337300312825604420.0948
ObesityDenmark1691230.00735805545750.01162115132190.011458478713325418.35553
Liver cirrhosisChina1201140.006206687388760.008607553144480.02120581479841234841.4794
Type II diabetesChina1831850.009703525753960.00693873732050.5970628457442280375.3594
Type II diabetesDenmark752770.0119728528060.00913777800270.742911315812555683.7709
Colorectal cancerAustria64350.00882321472710.009993330833980.7640495860642440882.5805
Type II diabetesSweden53920.004796641143610.00498970167290.7648854892482335379.0823
Rheumatoid arthritisChina127980.005464052829070.004267382854460.7859121095822454881.8621
Ulcerative colitisSpain78660.009246134758740.007715066280240.8250285726092626086.6266
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382