MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG28076
Description: ABC transporter, ATP-binding protein

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The abundance of bactNOG28076 across gut microbiome samples:





The prevalence of bactNOG28076 across gut microbiome samples:





Association of bactNOG28076 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesSweden53920.001323476749050.002029997197380.0124336339784711.59329
Type II diabetesChina1831850.0009768563390290.0001182767803260.1233286452911047934.631
Crohns diseaseSpain17663.03569849005e-050.0003731118725990.2107139044381714857.0158
Ulcerative colitisSpain78660.000780361040120.0003731118725990.5079362728031934063.7989
ObesityDenmark1691237.17786217592e-050.0002238429745680.551675131482060467.7518
Type II diabetesDenmark752770.0002454661866070.000134559813550.7433007830352556383.7939
Liver cirrhosisChina1201142.88014118585e-054.96953853463e-050.8520175700512819594.7126
Rheumatoid arthritisChina127986.11028452285e-050.0002837350137050.8966303442292760392.0482
Colorectal cancerAustria64350.002131014854970.003387894903430.9369326763072805494.9181
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382