MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG28174
Description: Amino acid ABC transporter protein

Click here to download results

The abundance of bactNOG28174 across gut microbiome samples:





The prevalence of bactNOG28174 across gut microbiome samples:





Association of bactNOG28174 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.0003024572337020.0001524632524420.017271527591225908.54391
Crohns diseaseSpain17662.0698076179e-050.0001524632524420.1109199599561410746.9044
Rheumatoid arthritisChina127988.27009022519e-055.11799430105e-050.2367564540611005733.5379
Type II diabetesSweden53920.0005305847231890.000703134171580.3172753326351091136.9472
Liver cirrhosisChina1201145.1975705466e-064.27355259665e-060.3269719029232217274.4785
Type II diabetesDenmark752770.0001611415126540.0001206586062030.7840016940782645886.7276
Colorectal cancerAustria64350.001108159735960.0009299408673540.7874841388252484084.0438
Type II diabetesChina1831852.3555553309e-051.69310443075e-050.809921752212678488.5142
ObesityDenmark1691238.97974113741e-050.0001640561968910.8973820587812835093.2228
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382