MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG28354
Description: ABC transporter ATP-binding protein

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The abundance of bactNOG28354 across gut microbiome samples:





The prevalence of bactNOG28354 across gut microbiome samples:





Association of bactNOG28354 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Rheumatoid arthritisChina127980.0002897028516460.0001605637226760.002195826574833481.1605
Liver cirrhosisChina1201140.0001677678283630.000185507131870.009488271722331073036.0442
Type II diabetesSweden53920.0002077391052350.0001947750499360.182310657618640721.6966
Crohns diseaseSpain17669.97609869741e-059.40549137092e-050.263804902241847861.4397
Type II diabetesDenmark752770.0002479293763460.0002092416688690.2640342109421474148.3201
ObesityDenmark1691230.0002151483547950.0001988424669150.6448085103332267674.5651
Ulcerative colitisSpain78669.46921221314e-059.40549137092e-050.7245100178892420779.8542
Colorectal cancerAustria64350.0002935770197610.0003074917258350.7907995318692491284.2875
Type II diabetesChina1831850.0002247048668150.0002367016866430.9512633657332945997.3562
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382