MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG30689
Description: ABC transporter, permease

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The abundance of bactNOG30689 across gut microbiome samples:





The prevalence of bactNOG30689 across gut microbiome samples:





Association of bactNOG30689 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Crohns diseaseSpain17660.0001590282983810.002378539141134.81270370866e-071580.525353
Liver cirrhosisChina1201140.0002635266935530.001175113767991.17676412407e-05368912.3921
ObesityDenmark1691230.003253063984950.003871096294230.0019030184345311513.78481
Type II diabetesSweden53920.003502169302620.004650006476690.004357091240061780.602777
Ulcerative colitisSpain78660.001866343143760.002378539141130.1350739032854428.185
Type II diabetesChina1831850.0009762015193010.0005133119976140.3428365603951732857.2656
Type II diabetesDenmark752770.003297864531630.003519192319450.5182806396222092168.5777
Rheumatoid arthritisChina127980.001777561062630.001379424836180.8316397053582565785.5604
Colorectal cancerAustria64350.002298764959620.00234284178670.9210905151252758593.3313
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382