MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG31806
Description: ABC transporter protein

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The abundance of bactNOG31806 across gut microbiome samples:





The prevalence of bactNOG31806 across gut microbiome samples:





Association of bactNOG31806 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
ObesityDenmark1691232.48126524184e-053.8325073219e-050.115153376535793526.0925
Type II diabetesChina1831851.30923331848e-052.9180217786e-060.1466060067351149237.9771
Liver cirrhosisChina1201141.04833217135e-050.00.1600371449911847062.0427
Rheumatoid arthritisChina127981.27225985483e-061.07102349997e-050.198479195305888929.6428
Type II diabetesSweden53920.0001719884203340.0003744095137780.267175124123898430.4216
Type II diabetesDenmark752774.14607862088e-053.04596574602e-050.2769483059191508449.4444
Colorectal cancerAustria64350.0006529438001050.0005256460576280.3593112715631405847.5639
Ulcerative colitisSpain78660.0004617076021294.81143941932e-050.411034149011703056.177
Crohns diseaseSpain17661.85107646222e-054.81143941932e-050.7593213204622722790.5287
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382