MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG37100
Description: ABC transporter ATP-binding protein

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The abundance of bactNOG37100 across gut microbiome samples:





The prevalence of bactNOG37100 across gut microbiome samples:





Association of bactNOG37100 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.07.91689912021e-050.08147312034391593253.5188
Rheumatoid arthritisChina127981.14631182542e-068.81289793606e-060.4422034257021596553.2381
Ulcerative colitisSpain78668.89048193737e-060.0001992216756190.5273368972911974865.1448
Colorectal cancerAustria64357.14964835424e-061.13763143807e-050.5409056935661924365.1069
Crohns diseaseSpain17660.0005054867771620.0001992216756190.5886087904192471182.1629
Type II diabetesDenmark752772.20534817587e-055.14249997246e-050.6439147915832364977.5183
Type II diabetesSweden53921.12815829804e-061.01898592383e-060.7452818571982277777.13
ObesityDenmark1691231.73512102151e-050.0001000770837050.852877495552749190.3982
Type II diabetesChina1831851.12326129706e-051.00879568128e-050.9251151070132896695.7252
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382