MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG56941
Description: Solute binding protein of ABC transporter for sugars

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The abundance of bactNOG56941 across gut microbiome samples:





The prevalence of bactNOG56941 across gut microbiome samples:





Association of bactNOG56941 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesChina1831850.001031795487850.0001350320524040.00052629850257313344.40861
Colorectal cancerAustria64350.00164611242280.003355845677180.115285252045560118.9505
Liver cirrhosisChina1201140.0001067880536022.21373858247e-050.1156833758341717357.6858
Crohns diseaseSpain17660.001207298170190.001616803194780.3474130606152052768.251
Rheumatoid arthritisChina127980.0001643125824490.0001803443588050.6152076731012027967.626
Ulcerative colitisSpain78660.0008107032155550.001616803194780.6224052854542207572.8211
Type II diabetesSweden53920.0007868102262970.0008151274855780.7508967184742305278.063
Type II diabetesDenmark752770.0001479640265460.0001463240638530.8508526982832760890.4973
ObesityDenmark1691230.0001576745442890.0001286447761620.8524126691632748290.3686
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382