MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG57396
Description: ABC transporter protein

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The abundance of bactNOG57396 across gut microbiome samples:





The prevalence of bactNOG57396 across gut microbiome samples:





Association of bactNOG57396 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesDenmark752770.000536770449356.00454031411e-050.03818118194654721.4606
Type II diabetesChina1831852.62756126349e-050.00.0688420829196804926.6003
Type II diabetesSweden53920.09.65461944221e-050.114204501699405713.7369
Ulcerative colitisSpain78660.05.60529544159e-050.132879001832838827.6704
Colorectal cancerAustria64350.01.5870514991e-050.183150203157804627.2212
Crohns diseaseSpain17660.05.60529544159e-050.4833870058552303976.6052
ObesityDenmark1691238.14252074633e-052.86867176033e-050.9841245373663013099.076
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382