MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG57547
Description: ABC transporter, permease protein

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The abundance of bactNOG57547 across gut microbiome samples:





The prevalence of bactNOG57547 across gut microbiome samples:





Association of bactNOG57547 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesChina1831850.008953917226640.003827894726970.0350305700245605320.004
Crohns diseaseSpain17660.002796181820610.003110600136070.2529155194941828960.8113
Liver cirrhosisChina1201140.009790092311450.004503300836370.2940175211612082469.952
Rheumatoid arthritisChina127980.004847170426540.004668896301860.3100110599541241141.3879
Type II diabetesSweden53920.002175440169440.002404548186090.3937390986021282243.4186
Colorectal cancerAustria64350.001160640460090.001143668371250.4306215444781571153.155
Type II diabetesDenmark752770.006054941425970.003577473509460.4445051866451921462.9823
Ulcerative colitisSpain78660.003734396576750.003110600136070.7844232524292541983.8523
ObesityDenmark1691230.003635749513130.003461242571650.7953669054832612785.913
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382