MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG57865
Description: ABC transporter protein

Click here to download results

The abundance of bactNOG57865 across gut microbiome samples:





The prevalence of bactNOG57865 across gut microbiome samples:





Association of bactNOG57865 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Crohns diseaseSpain17660.0003053607898060.002431337528721.75256886e-059783.25021
Type II diabetesSweden53920.001147992249870.002861256241050.01483631804795561.88283
Ulcerative colitisSpain78660.001458077040480.002431337528720.123728788288793426.1711
Type II diabetesChina1831850.001699019890590.002246815890760.1789618334661262941.7363
ObesityDenmark1691230.001874347470930.002004101862050.2702689245581339844.0564
Colorectal cancerAustria64350.001079466510420.001037735244610.37156049231433248.491
Type II diabetesDenmark752770.001656505901970.00193463297050.3990709983771817659.5798
Rheumatoid arthritisChina127980.002823430507690.004141774111470.7429144196622353178.4707
Liver cirrhosisChina1201140.004138082863680.002065096284420.7743413731522748192.3142
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382