MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG57988
Description: Sugar ABC transporter, substrate-binding protein

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The abundance of bactNOG57988 across gut microbiome samples:





The prevalence of bactNOG57988 across gut microbiome samples:





Association of bactNOG57988 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesChina1831850.0005661020684440.0001831339524330.043598227443661121.848
Rheumatoid arthritisChina127980.0001695266985870.0001638724101290.143300551649699323.3201
ObesityDenmark1691230.0001936956705090.0001336605022160.3836548724111648754.2139
Type II diabetesDenmark752770.0002843557569820.0001697319371390.4410256054961911662.661
Crohns diseaseSpain17660.0004987154690540.000492873909410.4949328092912339377.7805
Ulcerative colitisSpain78660.0006183556106250.000492873909410.4976691205921907062.9082
Liver cirrhosisChina1201149.7948636065e-056.02678506096e-050.6305615849672583586.7849
Colorectal cancerAustria64350.0007621391237080.0009278011724490.7726595921822457883.1574
Type II diabetesSweden53920.0001962338537850.0003638720909990.9352305361022783694.2635
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382