MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG59051
Description: Oligopeptide/Dipeptide ABC transporter

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The abundance of bactNOG59051 across gut microbiome samples:





The prevalence of bactNOG59051 across gut microbiome samples:





Association of bactNOG59051 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201149.25388468402e-050.0006536922737721.26440950781e-0721437.19876
Crohns diseaseSpain17660.0002726874132780.002307515142071.50060143759e-059123.03242
Type II diabetesChina1831850.001087612433630.000810181312310.0838354439416882529.1649
ObesityDenmark1691230.00211016959760.003083079881750.111806961212782925.744
Rheumatoid arthritisChina127980.002127550949440.001691421936090.136965570914681322.7198
Type II diabetesSweden53920.001727341832520.001996442955020.159719191837563219.0721
Ulcerative colitisSpain78660.001860997592670.002307515142070.2195387637851129037.2435
Type II diabetesDenmark752770.002305397499490.002517959268480.5526047434122161470.8493
Colorectal cancerAustria64350.001950400442410.001382624507410.8739489744052653589.777
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382