MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG75970
Description: ABC transporter, permease protein

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The abundance of bactNOG75970 across gut microbiome samples:





The prevalence of bactNOG75970 across gut microbiome samples:





Association of bactNOG75970 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201144.79527300543e-051.93606914157e-050.00595458215801988033.1889
Rheumatoid arthritisChina127989.14310522052e-051.77185546428e-050.015631045429814224.74205
Type II diabetesSweden53927.35896098073e-050.0001904201414550.174914539885619820.9871
ObesityDenmark1691235.75507235112e-053.99276781012e-050.2441944902091266641.6494
Type II diabetesDenmark752775.0200263601e-054.46780295937e-050.3491441736931697455.6397
Colorectal cancerAustria64350.0002884034598760.0002050100547160.4855216714621789860.5562
Ulcerative colitisSpain78663.0454626661e-052.33247245006e-050.8485286577282678388.3519
Type II diabetesChina1831856.03948059766e-058.7120532958e-050.898115615952842093.9225
Crohns diseaseSpain17660.0001198777814252.33247245006e-050.9680893360952961798.4771
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382