MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG78721
Description: ABC transporter, permease protein

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The abundance of bactNOG78721 across gut microbiome samples:





The prevalence of bactNOG78721 across gut microbiome samples:





Association of bactNOG78721 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201141.05285358823e-052.87559894212e-050.00376557162432919130.8744
Rheumatoid arthritisChina127989.16317343953e-050.0001119536462990.024956505230819626.54284
Type II diabetesChina1831850.0001823491424845.6221267339e-050.0697669262066811726.8251
Ulcerative colitisSpain78667.34580013765e-080.00.3555541235291542650.8874
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382