MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bactNOG85033
Description: ABC transporter protein

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The abundance of bactNOG85033 across gut microbiome samples:





The prevalence of bactNOG85033 across gut microbiome samples:





Association of bactNOG85033 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Crohns diseaseSpain17660.03.08558742704e-050.2043855982611696856.419
Rheumatoid arthritisChina127982.8624803178e-060.00.215450461032945331.522
Type II diabetesChina1831852.2768095126e-057.84785386074e-060.2441557746991460948.2782
Type II diabetesDenmark752772.08234666691e-062.15507283024e-050.3571102270741712856.1429
ObesityDenmark1691232.12104100228e-052.18471264685e-050.6605234152852304075.7604
Type II diabetesSweden53928.57104144719e-050.0001534122540110.8222673122442481084.0163
Ulcerative colitisSpain78665.47994738574e-053.08558742704e-050.8343139122722644687.2386
Colorectal cancerAustria64350.0001467115902190.0001053533117690.8708285194322649389.6349
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382