MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: bctoNOG05912
Description: ABC transporter permease

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The abundance of bctoNOG05912 across gut microbiome samples:





The prevalence of bctoNOG05912 across gut microbiome samples:





Association of bctoNOG05912 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesChina1831850.005943123811540.005615396325780.0039393948828626548.77094
Crohns diseaseSpain17660.002572659980530.004565396299390.1125208529011421647.2668
Colorectal cancerAustria64350.001461995783870.0004146996898010.171714227189749925.3722
Ulcerative colitisSpain78660.003821545017640.004565396299390.3350260755741482348.8965
Type II diabetesSweden53920.0007370029538830.0006866666607940.478657318371565152.9986
Liver cirrhosisChina1201140.009959429807270.005811316029150.6488551265082614487.8229
Type II diabetesDenmark752770.002082857585750.0031188481220.6509262426032380078.0149
Rheumatoid arthritisChina127980.003914564121940.0022938179620.760260889312394579.8513
ObesityDenmark1691230.00374381318190.002200492827460.8325212725762703388.8922
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382