MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: firmNOG00274
Description: ABC transporter protein

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The abundance of firmNOG00274 across gut microbiome samples:





The prevalence of firmNOG00274 across gut microbiome samples:





Association of firmNOG00274 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.001541535182084.33387240583e-054.91806381985e-128802.9561
Type II diabetesDenmark752778.58798390254e-064.57674980646e-050.1766587421931233640.4366
Type II diabetesSweden53920.0001187408494540.0002495686363920.254261772045865529.3092
Crohns diseaseSpain17660.0009317416992523.05554363656e-050.5273499869412382679.2219
Colorectal cancerAustria64350.0002141175717160.0001381268977380.7587463194382430682.2371
Type II diabetesChina1831857.00432260384e-055.31969675157e-050.7635893740712598485.872
Rheumatoid arthritisChina127980.0002253311016770.0001179117177660.8410615460372590286.3774
ObesityDenmark1691235.72579235268e-052.87924028214e-050.9562645878052951497.0504
Ulcerative colitisSpain78667.92244193387e-053.05554363656e-050.9913060398933011699.3468
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382