MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: firmNOG01053
Description: ABC transporter protein

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The abundance of firmNOG01053 across gut microbiome samples:





The prevalence of firmNOG01053 across gut microbiome samples:





Association of firmNOG01053 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.0001385025240440.00.003836205168411213.69631
Type II diabetesChina1831850.0004013620574762.52363570129e-050.0658659470773785325.9526
Rheumatoid arthritisChina127984.19435590894e-050.0002315464656450.108215806888562518.7581
Type II diabetesDenmark752770.0002696176771629.73674347026e-050.3920179477561800759.0258
Type II diabetesSweden53925.57663127741e-050.0001693628493320.5491644221281734258.725
Liver cirrhosisChina1201141.34933038878e-062.06776848676e-050.5534815259472483283.414
ObesityDenmark1691238.85382007482e-050.0001092170743240.6369477799362248773.9436
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382