MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: eggnog
Level: gene_family
Name: firmNOG02298
Description: ABC transporter protein

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The abundance of firmNOG02298 across gut microbiome samples:





The prevalence of firmNOG02298 across gut microbiome samples:





Association of firmNOG02298 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Crohns diseaseSpain17660.0003243018810980.0008064413395730.03114514135371032434.3275
ObesityDenmark1691230.0007333102123990.001004919980160.0797266459057649521.3574
Liver cirrhosisChina1201140.0006680517484630.0008021237396560.09019800600611633254.8624
Type II diabetesDenmark752770.0003699196759650.0008476879695620.1691576223721206739.5549
Ulcerative colitisSpain78660.0003981217837120.0008064413395730.240032928591197939.5164
Colorectal cancerAustria64350.0001660803501410.0004485531221560.245339797191031134.8863
Type II diabetesSweden53920.00223889268030.001051645988460.260336925992881329.8442
Rheumatoid arthritisChina127980.0005280059254360.0004139550039730.3870719824861444648.1742
Type II diabetesChina1831850.0002946574093670.0008190210309270.8036784888232666788.1292
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382