MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: function
Database: kegg
Level: gene_family
Name: K05663
Description: ABC.ATM; mitochondrial ABC transporter ATM

Click here to download results

The abundance of K05663 across gut microbiome samples:





The prevalence of K05663 across gut microbiome samples:





Association of K05663 abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Ulcerative colitisSpain78660.0002214808149152.57318044367e-050.004303676282141372.03627
Liver cirrhosisChina1201142.64714525142e-050.0001044238852680.195995261182411962.2883
Colorectal cancerAustria64352.52353361816e-052.58069714099e-060.21981550459291543.8017
Type II diabetesChina1831854.57175526771e-055.17427144144e-050.240012281501371555.4395
Crohns diseaseSpain17660.02.57318044367e-050.250480396504489472.8525
ObesityDenmark1691230.0001781910352461.59934499099e-050.266152972813383656.9985
Type II diabetesSweden53922.09415826854e-058.85042784667e-050.404682734944293443.9739
Type II diabetesDenmark752771.89797438604e-050.0001121697725160.441869388184526978.268
Rheumatoid arthritisChina127984.64178561482e-055.72873498325e-050.660012546822445767.1235
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382