MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: taxa
Database: mOTU
Level: species
Name: [Clostridium] bartlettii (ref-1533)
Description: None

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The abundance of [Clostridium] bartlettii (ref-1533) across gut microbiome samples:





The prevalence of [Clostridium] bartlettii (ref-1533) across gut microbiome samples:





Association of [Clostridium] bartlettii (ref-1533) abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Type II diabetesDenmark752779.33033503528e-050.0002749444725225.78131212023e-0820.447427
Rheumatoid arthritisChina127980.0006630416750520.0005843705740640.035388977034911.4219
Liver cirrhosisChina1201140.0005943198037160.0006206043955860.062339452139126062.6506
Ulcerative colitisSpain78660.0005511976272250.0004680962759120.18122989570518742.0225
Type II diabetesSweden53920.001683484692380.001663311285340.2591697787314833.945
Crohns diseaseSpain17660.008276489896550.0004680962759120.34672577693930569.161
ObesityDenmark1691230.0002343759972820.0003359421154420.56906523844932573.3634
Type II diabetesChina1831850.0002713177621440.0003124890156620.78176280713835884.0376
Colorectal cancerAustria64350.001602192118210.001735063513110.87155010319938989.016
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382