MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: taxa
Database: mOTU
Level: species
Name: Clostridium leptum (ref-1573)
Description: None

Click here to download results

The abundance of Clostridium leptum (ref-1573) across gut microbiome samples:





The prevalence of Clostridium leptum (ref-1573) across gut microbiome samples:





Association of Clostridium leptum (ref-1573) abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201142.0845701921e-050.0001073841996286.66083999644e-059021.6867
Crohns diseaseSpain17660.0004294981875520.0005068827467720.011807888340810624.0363
Rheumatoid arthritisChina127980.0003075851701530.0001639085747650.05295054588376214.4522
ObesityDenmark1691230.0003919024858510.0002276422163370.07594049988878519.1874
Type II diabetesChina1831850.0002802650847480.0002253573727540.08932406647259522.3005
Type II diabetesSweden53920.001008815273680.001462957168840.1077520694098319.0367
Type II diabetesDenmark752770.0005333681357640.0003258247546280.12064571463114031.3199
Ulcerative colitisSpain78660.000709435638080.0005068827467720.25702144625622350.1124
Colorectal cancerAustria64350.0005571340519760.0007035400081751.043699.7712
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382