MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: taxa
Database: mOTU
Level: species
Name: Clostridium perfringens (ref-1541)
Description: None

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The abundance of Clostridium perfringens (ref-1541) across gut microbiome samples:





The prevalence of Clostridium perfringens (ref-1541) across gut microbiome samples:





Association of Clostridium perfringens (ref-1541) abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.00173724426367.93034620402e-057.61664474257e-075413.012
Ulcerative colitisSpain78666.45751773463e-051.09335568197e-050.02251185913247717.3034
Type II diabetesSweden53920.01.01919106114e-050.17838340631210724.5413
ObesityDenmark1691236.61324924624e-065.79022967169e-050.36223471308724354.8533
Colorectal cancerAustria64356.93246300404e-050.0001216998292180.45415243288722751.9451
Type II diabetesDenmark752777.03274798522e-064.38616042899e-060.5298837480631470.2461
Crohns diseaseSpain17663.76139785128e-051.09335568197e-050.55834957239635780.9524
Rheumatoid arthritisChina127980.0001521085613050.000324068911110.69905953936532275.0583
Type II diabetesChina1831850.0001212870137130.0001365073428040.80520848633336986.6197
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382