MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: taxa
Database: mOTU
Level: species
Name: Clostridium sp. HGF2 (ref-1278)
Description: None

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The abundance of Clostridium sp. HGF2 (ref-1278) across gut microbiome samples:





The prevalence of Clostridium sp. HGF2 (ref-1278) across gut microbiome samples:





Association of Clostridium sp. HGF2 (ref-1278) abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.0004163600734659.77238513656e-056.82710835494e-075312.7711
Type II diabetesDenmark752779.97063652257e-053.99993163168e-050.000342460088424112.46085
Type II diabetesChina1831850.0006612143611550.0001853507870680.000645222967714143.28639
Crohns diseaseSpain17660.0007512189674990.0003035271414110.002555726809137517.0068
Rheumatoid arthritisChina127980.0002076763372390.0001694095208720.17422427175314333.3333
Type II diabetesSweden53920.0002476213820310.0002555915286790.57911150358228064.2202
Ulcerative colitisSpain78660.0005977130157660.0003035271414110.58857485763433575.2809
ObesityDenmark1691233.97104550559e-054.0055338708e-050.86136096380240992.3251
Colorectal cancerAustria64350.001462433253990.0007709048301171.043699.7712
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382