MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: taxa
Database: metaphlan2
Level: taxon
Name: Clostridium_bolteae_unclassified
Description: None

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The abundance of Clostridium_bolteae_unclassified across gut microbiome samples:





The prevalence of Clostridium_bolteae_unclassified across gut microbiome samples:





Association of Clostridium_bolteae_unclassified abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.001737545283980.001002046649730.0002924711365666626.7206
Crohns diseaseSpain17660.002688541775060.0005499187481880.0009236109466143111.8774
Type II diabetesDenmark752770.0008012756313450.0002111586956780.00872430227655186.92308
Type II diabetesChina1831850.007927917645450.001310826698160.01471778375273513.834
ObesityDenmark1691230.0002158500728170.000202494019660.0206147294834114.33071
Ulcerative colitisSpain78660.0005141808503550.0005499187481880.25812323794211945.2471
Rheumatoid arthritisChina127980.0007656271421440.00204599730680.63743706689719776.0618
Type II diabetesSweden53920.0003551736156540.0001941519249520.6697199066817675.2137
Colorectal cancerAustria64350.0004278427011179.85433361787e-050.85703679407821688.8889
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382