MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: taxa
Database: metaphlan2
Level: taxon
Name: Clostridium_hathewayi_unclassified
Description: None

Click here to download results

The abundance of Clostridium_hathewayi_unclassified across gut microbiome samples:





The prevalence of Clostridium_hathewayi_unclassified across gut microbiome samples:





Association of Clostridium_hathewayi_unclassified abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.0006257368834820.0001676940106832.38460288385e-083313.3603
Type II diabetesDenmark752770.0001988814024170.0001456231021690.0015487093417983.07692
Crohns diseaseSpain17660.0006324946257278.90944955585e-050.002951977773464517.2414
Type II diabetesChina1831850.0007414373775580.0002954997490080.00418051837644249.48617
Colorectal cancerAustria64350.0001940595510380.00064661752850.1847260733056225.5144
Rheumatoid arthritisChina127980.0002828552956240.0005524013092080.31566143868212849.4208
Ulcerative colitisSpain78660.0004470170277448.90944955585e-050.43757266186716261.597
Type II diabetesSweden53920.0001085820356420.0002672816149450.86905445048621089.7436
ObesityDenmark1691236.24814405456e-050.0002641550189030.91889373328323994.0945
Click on arrows to sort table data. Shift+click to sort by multiple columns.

Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382