MetaQuery: quantitative analysis of the human gut microbiome

Results

Estimated abundances and results from statistical analyses

Job details:

Query type: taxa
Database: metaphlan2
Level: taxon
Name: Clostridium_symbiosum_unclassified
Description: None

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The abundance of Clostridium_symbiosum_unclassified across gut microbiome samples:





The prevalence of Clostridium_symbiosum_unclassified across gut microbiome samples:





Association of Clostridium_symbiosum_unclassified abundance with clinical phenotypes:

Boxplots:


Statistics:

pheno country case_n ctrl_n case_mean ctrl_mean p_value rank percentile
Liver cirrhosisChina1201140.001038887646220.000223993010563.70043529505e-092710.9312
Crohns diseaseSpain17660.002912413394190.0003188502488890.000276265889639238.81226
Type II diabetesDenmark752770.0001771714922160.0001509176759540.0019014122412593.46154
Type II diabetesChina1831850.001306589105410.0008059198137170.007660412830332911.4625
Rheumatoid arthritisChina127980.0002495859220270.0003230832054650.03567535938463312.7413
Type II diabetesSweden53920.0002839883901440.0001806657269620.2644108539499138.8889
ObesityDenmark1691230.0001146551013730.0002018284350240.38438923864310742.126
Ulcerative colitisSpain78660.000349226926710.0003188502488890.5038499795218369.5817
Colorectal cancerAustria64350.0008321521118880.001487549945250.62209222472616467.4897
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Citation:

Nayfach S, Fischbach MA, Pollard KS. MetaQuery: a web server for rapid annotation and quantitative analysis of specific genes in the human gut microbiome. Bioinformatics 2015;31(14). doi:10.1093/bioinformatics/btv382